rbiom - Read/Write, Analyze, and Visualize 'BIOM' Data
A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, subsetting, visualizations, and statistical analysis. All CPU intensive operations are written in C.
Last updated 27 days ago
7.65 score 12 stars 5 packages 164 scripts 508 downloadsfillpattern - Patterned Fills for 'ggplot2' and 'grid' Graphics
Adds distinctive yet unobtrusive geometric patterns where solid color fills are normally used. Patterned figures look just as professional when viewed by colorblind readers or when printed in black and white. The dozen included patterns can be customized in terms of scale, rotation, color, fill, line type, and line width. Compatible with the 'ggplot2' package as well as 'grid' graphics.
Last updated 5 months ago
3.70 score 5 stars 9 scripts 498 downloadssemaphore - Shared Memory Atomic Operations
Implements named semaphores from the 'boost' 'C++' library <https://www.boost.org/>. A semaphore object is shared amongst several processes. This integer value can be safely incremented or decremented by each processes. Processes can also wait (blocking) for the value to become non-zero.
Last updated 7 days ago
3.00 score 1 stars 10 downloads